CDS

Accession Number TCMCG017C20234
gbkey CDS
Protein Id OMO83519.1
Location complement(join(32194..32404,32507..32620,32723..32826,32913..33020,33142..33222,33317..33385,33611..33700,34030..34119,34368..34457,34651..34716,34804..35043,35332..35448,35561..35695,35903..36025,36158..36247,36362..36497,36645..36710,37073..37258,37637..37760,37890..37986,38165..38257))
GeneID InterPro:IPR005378
Organism Corchorus olitorius
locus_tag COLO4_22465

Protein

Length 809aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01017971.1
Definition Vacuolar protein sorting-associated protein 35 [Corchorus olitorius]
Locus_tag COLO4_22465

EGGNOG-MAPPER Annotation

COG_category U
Description Plays a role in vesicular protein sorting
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K18468        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005771        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0016482        [VIEW IN EMBL-EBI]
GO:0030904        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042147        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATCGCTGACGGAGTCGAAGACGAAGAGAAATGGCTTGCTGCGGGCATCGCCGGCCTTCAACAGAACGCTTTCTACATGCATCGCGCTTTGGATTCAAACAATCTCAGAGATGCTTTGAAGTATTCTGCTCAGATGTTATCAGAGCTTCGAACCTCGAGGCTTTCTCCACACAAATACTACGAACTATATATGCGAGCATTTGATGAATTAAGGAAGCTGGAGATGTTTTTTAAGGAAGAGACAAGGCGTGGTTGCTCTATTATCGATCTGTATGAGCTCGTCCAGCATGCTGGCAATATATTGCCTAGATTATATCTTCTCTGTACCGTAGGCTGTGTATATATCAAAACCAAGGAAGCTCCTGCTAAGGATGTTCTTAAAGATCTTGTTGAAATGTGCCGTGGCATACAGCATCCTGTACGTGGGCTCTTTCTAAGGAGCTACCTGGCTCAAGTTAGTAGGGATAAATTGCCGGATATAGGTTCTGAGTATGAAGGGGATGCGGACTCGGTCGTGGATGCTGTGGAATTTGTGCTTCAAAACTTCACAGAGATGAACAAGTTGTGTTATACTGCTTGTCAATCATTCATACTCTTAGCTGATCCTGAGTTGAGGCTTGCTGTCGGGCTTTCTGGTCTGCAGGGACCTGCCCGAGAAAAGGAGAAACGGGAGAAAGAGAGGAGCGAGCTACGCGATCTTGTTGGGAAGAATCTTCATGTACTCGGTCAGATAGAGGGTGTTGACCTTGATATGTACAAAGATACCGTTCTTCCCAGAGTCCTTGAACAGGTTGTTAATTGTAAAGATGAGCTAGCTCAATACTATCTAATGGATTGCATAATTCAAGTCTTTCCTGATGAATACCACTTGCAAACTCTTGATGTCTTGTTGGGTGCTTTCCCACAACTTCAGCCAACTGTTGACATTAAAACAGTTCTATCTCGATTAATGGAAAGGCTATCAAATTATGCTGCTTCAAGTGCAGATGTTTTGCCTGAGTTCTTGCAAGTAGAAGCTTTTTCGAAGTTGAATAATGCTATAGGAAAGGTGATCGAAGCACAGCCTGATATGCCTACACTCGGGGTGATAACTTTATATTCGTCTCTTCTTACTTTTACCCTCCATGTCCACCCAGAGCGACTTGATTATGCGGATCAAGTGTTGGGAGCATGTGTGAAAAAACTCTCTGGCAAAGGAAAGCTTCAAGACAACAAAGCGACAAAACAGATTGTTGCCCTTTTAAGTGCTCCACTTGAGAAATATAATGATATTGTTACAGCATTGAAGCTTTCAAATTATCCTCGTATGATGGAATACCTTGACAGTGAAACTAATAAAGTCATGGCAACTGTGATAATTCAAAGCATTATGAAGAACAAAACGCGTATCTCTACTGCTGACAGGGTTGAGGCGCTGTTTGAACTGATAAAAGGCCTTATTAAGGATCTGGATGGGAGTCCTGATGATGAGGTTGATGAAGATGATTTTAAGGAGGAGCAGAATTCTGTTGCACGCCTTATCCAGATGTTGTATAATGATGATCCAGAAGAGATGTTTAAGATAATATGCACAGTGAGGAAGCATATCTTGGCTGGAGGACCAAAACGTCTGCCCTTCACTGTCCCTCCCCTTGTTTATTCTTCACTTAAGTTGGTTCGGCAACTACAAAGCCAAGAAGAAAACCCATTTGGAGAGGAGGAGTCAACGACACCAAAGAAAATATTCCAGCTTTTGAATCAGACTGTTGAAACCCTCTCAAATGTTCCAGCCCCTGAGTTGGCACTACAGCTGTATTTGCAGTGTGCTGAGGCTGCAAATGACTGCGATTTAGAACCTGTAGCATATGAATTCTTCACACAAGCTTACATTTTATATGAAGAAGAAATTTCGGACTCTAGGGCACAGGTGACTGCAATACATTTGATAATTGGAACTCTGCAAAGGATGCATGTCTTTGGTGTTGAAAATAGGGATACTTTAACACACAAGGCTACCGGGTATTCTGCAAAACTCTTGAAGAAGCCTGATCAGTGCAGAGCTGTTTATGCATGTTCACATCTCTTCTGGGTTGATGATCAGGACAATATAAAAGATGGAGAGAGGGTCTTGCTTTGTCTCAAGCGAGCATTGAGAATTGCAAATGCTGCTCAACAGATGTCCAATGCGGCACGAGGTAGCACTGGATCAGTCACTCTGTTTGTTGAGATACTGAACAAGTACCTTTATTTCTATGAGAAGGGGAACCCCCAGATCAACGTTGCTGCAATCCAGAGCCTGATTGAGTTGATTACAACTGAGATGCAAAGCGAGACTAGCACACCGGATCCTGCAGCAGATGCTTTCTTTGCCAGCACACTCCGATATATAGAATTCCAGAAACAGAAAGGTGGGGCAGTGGGTGAAAAATATGAGCCTATCAAGGTGTGA
Protein:  
MIADGVEDEEKWLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSRLSPHKYYELYMRAFDELRKLEMFFKEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGCVYIKTKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLAQVSRDKLPDIGSEYEGDADSVVDAVEFVLQNFTEMNKLCYTACQSFILLADPELRLAVGLSGLQGPAREKEKREKERSELRDLVGKNLHVLGQIEGVDLDMYKDTVLPRVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLDVLLGAFPQLQPTVDIKTVLSRLMERLSNYAASSADVLPEFLQVEAFSKLNNAIGKVIEAQPDMPTLGVITLYSSLLTFTLHVHPERLDYADQVLGACVKKLSGKGKLQDNKATKQIVALLSAPLEKYNDIVTALKLSNYPRMMEYLDSETNKVMATVIIQSIMKNKTRISTADRVEALFELIKGLIKDLDGSPDDEVDEDDFKEEQNSVARLIQMLYNDDPEEMFKIICTVRKHILAGGPKRLPFTVPPLVYSSLKLVRQLQSQEENPFGEEESTTPKKIFQLLNQTVETLSNVPAPELALQLYLQCAEAANDCDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDNIKDGERVLLCLKRALRIANAAQQMSNAARGSTGSVTLFVEILNKYLYFYEKGNPQINVAAIQSLIELITTEMQSETSTPDPAADAFFASTLRYIEFQKQKGGAVGEKYEPIKV